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coco-pipe 0.0.1 documentation
coco-pipe 0.0.1 documentation

Contents:

  • CoCo Pipe
  • Dim Reduction Workflows
  • Visualizing Dynamics: Velocity Embeddings
  • Benchmarking Dimensionality Reduction: The Epistemology of Embeddings
  • Report Generation Demo
  • Iterative Balancing Demo
  • Benchmark Dimensionality Reduction Methods
  • Scientific vs. Generic Dimensionality Reduction
  • End-to-End Pipeline Demo
  • Data Structures Demo
  • API Reference
    • coco_pipe
      • coco_pipe.decoding
        • coco_pipe.decoding.configs
        • coco_pipe.decoding.core
        • coco_pipe.decoding.registry
        • coco_pipe.decoding.utils
      • coco_pipe.descriptors
        • coco_pipe.descriptors.configs
        • coco_pipe.descriptors.core
        • coco_pipe.descriptors.extractors
          • coco_pipe.descriptors.extractors._parametric_fit
          • coco_pipe.descriptors.extractors._psd
          • coco_pipe.descriptors.extractors.base
          • coco_pipe.descriptors.extractors.complexity
          • coco_pipe.descriptors.extractors.parametric
          • coco_pipe.descriptors.extractors.spectral
        • coco_pipe.descriptors.validation
      • coco_pipe.dim_reduction
        • coco_pipe.dim_reduction.analysis
        • coco_pipe.dim_reduction.config
        • coco_pipe.dim_reduction.core
        • coco_pipe.dim_reduction.evaluation
          • coco_pipe.dim_reduction.evaluation.core
          • coco_pipe.dim_reduction.evaluation.geometry
          • coco_pipe.dim_reduction.evaluation.metrics
          • coco_pipe.dim_reduction.evaluation.velocity
        • coco_pipe.dim_reduction.reducers
          • coco_pipe.dim_reduction.reducers.base
          • coco_pipe.dim_reduction.reducers.linear
          • coco_pipe.dim_reduction.reducers.manifold
          • coco_pipe.dim_reduction.reducers.neighbor
          • coco_pipe.dim_reduction.reducers.neural
          • coco_pipe.dim_reduction.reducers.spatiotemporal
          • coco_pipe.dim_reduction.reducers.topology
      • coco_pipe.fm
        • coco_pipe.fm.cbramod
          • coco_pipe.fm.cbramod.pipeline
      • coco_pipe.io
        • coco_pipe.io.config
        • coco_pipe.io.dataset
        • coco_pipe.io.load
        • coco_pipe.io.structures
        • coco_pipe.io.transform
        • coco_pipe.io.utils
      • coco_pipe.report
        • coco_pipe.report.api
        • coco_pipe.report.config
        • coco_pipe.report.core
        • coco_pipe.report.engine
        • coco_pipe.report.provenance
        • coco_pipe.report.quality
      • coco_pipe.utils
      • coco_pipe.viz
        • coco_pipe.viz.dim_reduction
        • coco_pipe.viz.plotly_utils
        • coco_pipe.viz.plots
        • coco_pipe.viz.utils
  • GitHub Repository
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coco_pipe.report¶

Reporting module for generating single-file HTML quality control reports.

Submodules¶

  • coco_pipe.report.api
  • coco_pipe.report.config
  • coco_pipe.report.core
  • coco_pipe.report.engine
  • coco_pipe.report.provenance
  • coco_pipe.report.quality
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coco_pipe.report.api
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